ChromasPro用于将序列读数组装成contigs
。有一个图形contig编纂器
，显示对齐的色谱图
。它还能够进行通常的序列分析
，如限度性酶图谱、盛开读码框搜索和BLAST提交
。

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ChromasPro合用于高达几兆的DNA序列组装项目
，以及根基的序列编纂和分析
。它可能组装来自Sanger测序仪（如ABI）和454和Illumina下一代测序仪的数据
，若是有8GB内存的话
，至多可组装1,000,000条序列
。ChromasPro拥有以下特点：

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• 以Applied Biosystems .ab1, Staden Chromatogram (SCF and ZTR), 454 SFF, FASTA, FASTQ, EMBL, GenBank, SwissProt, GenPept, GCG RSF和纯文本体式打开序列
  。

• 以.ab1、.scf、.fasta和.fastq体式保留序列
  。

• 使用图形界面组装沉叠的序列
  ，天生共识
  ，并凸起显示闪动其词的处所供编纂
  。

• 使用质量数据自动去除低质量的序列
  ，以提高序列组装
  。

• 使用参考序列作为组装的支架
  。

• 天生限度性位点和片段图
  ，并列出切割、无切割和片段
  。

• 在G+C框架图的援手下
  ，绘造盛开阅读框架图
  ，并一键翻译ORFs
  。

• 打印色谱图、限度性位点和片段图以及盛开阅读框架图
  。

• 通过NCBI网站进行核苷酸和蛋白质BLAST搜索
  。

• 通过与ClustalW对接进行多沉比对
  。

• 回转和补充序列和色谱图
  。

• 通过正确匹配或optimal分列搜索序列
  。

• 在编纂核苷酸序列时显示翻译
  。

• 进行反向翻译并绘造核苷酸退化图
  。

• 绘造蛋白质的亲水性和抗原性
  。

• 复造色谱图部门的图像
  ，以便粘贴到文档或演示文稿中
  。

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系统要求：

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与Windows 7 sP1
，8
，10和11

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【英文介绍】

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ChromasPro is for assembly of sequence reads into contigs, with a graphical contig editor which displays aligned chromatograms. It also peforms general sequence analysis such as restriction enzyme mapping, open-reading-frame searches, and BLAST submission.

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ChromasPro is suitable for DNA sequence assembly projects up to a few megabases, and basic sequence editing and analysis. It is able to assemble data from Sanger sequencers such as ABI, and 454 and Illumina next-generation sequencers, with up to 1,000,000 sequences if 8 Gb RAM is available. ChromasPro has the following features:

• Open sequences in Applied Biosystems .ab1, Staden Chromatogram (SCF and ZTR), 454 SFF, FASTA, FASTQ, EMBL, GenBank, SwissProt, GenPept, GCG RSF and plain text formats.

• Save sequences in .ab1, .scf, .fasta and .fastq formats.

• Assemble overlapping sequences using a graphical interface, generate a consensus and highlight ambiguities for editing.

• Use quality data to automatically remove low quality sequence for improved sequence assembly.

• Use a reference sequence as a scaffold for assembly.

• Generate restriction site and fragment maps, and list cutters, non-cutters and fragments.

• Map open reading frames, aided by a G+C frame plot, and translate ORFs with one click.

• Print chromatograms, restriction site and fragment maps, and open reading frame maps.

• Perform nucleotide and protein BLAST searches through the NCBI web site.

• Perform multiple alignments by interfacing with ClustalW.

• Reverse & complement sequences and chromatograms.

• Search for sequences by exact matching or optimal alignment.

• Display translations when editing nucleotide sequences.

• Perform reverse translations and plot nucleotide degeneracy.

• Plot hydrophilicity and antigenicity of proteins.

• Copy an image of a chromatogram section for pasting into documents or presentations.

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